MEME Suite - Statistical Summary

Program Overview

MEME

10

motifs found

Primary: 2525 sequences

Control: 0 sequences

Best E-value: 2.5e-113

DREME

5

motifs found

Primary: 2525 sequences

Control: 2525 sequences

Best E-value: 8.6e-182

Background Frequencies

Base	Frequency
A	0.262
C	0.238
G	0.238
T	0.262

Motif Length Distribution

MEME

19

(1)

20

(9)

DREME

8

(5)

Top Motifs by E-value

MEME

ID	Consensus	Length	Sites	E-value
motif_1	`GCCTCCC[AG]A[GA][TG][TA]GCTGGGA[TC]`	20	1000	8.4e-050
motif_2	`A[AG]TCCCAGC[AT][CA][TC]T[TC]GGGAGG`	20	1000	6.5e-049
motif_3	`C[TAC][CA]TG[TC][TAC][GC][CT]CCAG[GC]CTGG[AGT][CG]`	20	1000	1.9e-039
motif_4	`[TA][AT][TA][AT][TA][TA]T[TA][TA][AT][AT][AT][TA][TA][TA][AT][AT][TA][AT][TA]`	20	1000	2.5e-113
motif_5	`[AT][AT][AT][AT][AT][AT][AT][AT][AT]AAA[AT][AT][AT][AT]A[AT][AT][AT]`	20	1000	1.6e-066

DREME

ID	Consensus	Length	Sites	E-value
m01	`CVGCCKCC`	8	5972	8.6e-182
m02	`AWAAWAAA`	8	10391	2.0e-171
m03	`GGATTACA`	8	1778	7.8e-157
m04	`CAGCCYGG`	8	3702	2.5e-140
m05	`GCCRCYGC`	8	2681	9.9e-125

Tomtom Matches

Query Motif	Matches	Best Target	Best p-value
AAAAAAAAAAAAAAAAAAAA (MEME-8)	19	RNCMPT00043 (6.05e-05)	6.05e-05
AATCCCAGCWMYTTGGGAGG (MEME-2)	7	RNCMPT00160 (1.07e-03)	1.07e-03
AGSYCAGGAGTTYGAGACCA (MEME-10)	0
CHCTGYHSYCCAGSCTGGDS (MEME-3)	0
GCCTCCCRARKWGCTGGGAT (MEME-1)	9	RNCMPT00160 (4.38e-04)	4.38e-04
SYCTRSBMAAMATASWRAA (MEME-9)	11	RNCMPT00158 (5.78e-03)	5.78e-03
TACAGGCRTGAGCCACCRYG (MEME-7)	0
TTTTTTTTTTTTTTTTTKTW (MEME-6)	20	RNCMPT00043 (4.25e-05)	4.25e-05
WAAAWAWAWAAAAWAAAAWW (MEME-5)	23	RNCMPT00274 (2.00e-04)	2.00e-04
WWWWTTTTTAWWWTWWAWWT (MEME-4)	6	RNCMPT00165 (7.41e-03)	7.41e-03